Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC188H7C350 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC188H7C350 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CCDC188H7C350 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC188H7C350 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC188H7C350 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC188H7C350 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC188H7C350 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC188H7C350 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CCDC188H7C350 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC188H7C350 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC188H7C350 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCDC188H7C350 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC188H7C350 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC188H7C350 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC188H7C350 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CCDC188H7C350 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC188H7C350 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC188H7C350 FAM8A3P-201ENST00000427218 844 ntBASIC16.47■□□□□ 0.23
CCDC188H7C350 PHKG1P2-201ENST00000457537 863 ntBASIC16.47■□□□□ 0.23
CCDC188H7C350 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC188H7C350 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.47■□□□□ 0.23
CCDC188H7C350 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC188H7C350 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CCDC188H7C350 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC188H7C350 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC188H7C350 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC188H7C350 OR2I1P-210ENST00000642037 4691 ntBASIC16.47■□□□□ 0.23
CCDC188H7C350 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC188H7C350 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC188H7C350 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC188H7C350 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC188H7C350 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC188H7C350 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC188H7C350 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CCDC188H7C350 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC188H7C350 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CCDC188H7C350 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC188H7C350 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC188H7C350 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC188H7C350 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
CCDC188H7C350 AC005912.2-201ENST00000619492 2400 ntBASIC16.46■□□□□ 0.23
CCDC188H7C350 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC188H7C350 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC188H7C350 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.46■□□□□ 0.23
CCDC188H7C350 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
CCDC188H7C350 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC188H7C350 AC105233.2-201ENST00000523697 349 ntBASIC16.46■□□□□ 0.23
CCDC188H7C350 AF228730.5-201ENST00000530288 346 ntBASIC16.46■□□□□ 0.23
CCDC188H7C350 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CCDC188H7C350 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC188H7C350 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC188H7C350 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC188H7C350 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC188H7C350 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC188H7C350 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC188H7C350 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 AL359258.3-201ENST00000622910 2331 ntBASIC16.46■□□□□ 0.23
CCDC188H7C350 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CCDC188H7C350 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC188H7C350 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC188H7C350 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CCDC188H7C350 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC188H7C350 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC188H7C350 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 MYO15B-237ENST00000642007 4893 ntBASIC16.45■□□□□ 0.22
CCDC188H7C350 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC188H7C350 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC188H7C350 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CCDC188H7C350 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC188H7C350 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC188H7C350 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms