Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 RHOQP3-201ENST00000437982 621 ntBASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 KRT18P2-201ENST00000447938 1258 ntBASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 GPAA1P2-202ENST00000606848 1787 ntBASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 REXO1L3P-201ENST00000622202 1288 ntBASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 KRT8P39-201ENST00000396270 1433 ntBASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 TOP3BP1-201ENST00000420768 1380 ntBASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 PGAM5P1-201ENST00000518923 814 ntBASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 AC005412.3-201ENST00000580309 715 ntBASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 AC010507.1-201ENST00000633895 436 ntBASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4B1Q9Y6B7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 AC107918.2-201ENST00000530817 355 ntBASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
AP4B1Q9Y6B7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms