Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDHGC3Q9UN70 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 HCG24-202ENST00000414398 717 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 AL390754.1-201ENST00000619088 582 ntBASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC3Q9UN70 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
PCDHGC3Q9UN70 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PCDHGC3Q9UN70 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGC3Q9UN70 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PCDHGC3Q9UN70 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 AC092337.1-201ENST00000568699 1129 ntBASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 AC015910.1-201ENST00000579400 975 ntBASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC3Q9UN70 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC3Q9UN70 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms