Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 AC020765.3-201ENST00000613051 740 ntBASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.27■□□□□ 0.04
CNOT11Q9UKZ1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNOT11Q9UKZ1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 TIMM8BP1-201ENST00000452384 211 ntBASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 AC092183.1-201ENST00000469884 875 ntBASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 SNHG9-202ENST00000564014 471 ntBASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 AL135744.1-201ENST00000565098 629 ntBASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 AC022145.2-201ENST00000598203 171 ntBASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 WASH6P-202ENST00000359512 1437 ntBASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNOT11Q9UKZ1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 AGAP7P-201ENST00000582299 2062 ntBASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 AGAP14-201ENST00000624701 2060 ntBASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.25■□□□□ 0.03
CNOT11Q9UKZ1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms