Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 TOMM22P5-201ENST00000416399 439 ntBASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 AC015922.1-201ENST00000421102 1152 ntBASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 SPDYE18-201ENST00000510091 1050 ntBASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 AC004790.1-201ENST00000612686 536 ntBASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 AL109954.1-202ENST00000564051 2148 ntBASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.54■□□□□ 0.4
BLOC1S4Q9NUP1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 AC138035.3-201ENST00000622706 2791 ntBASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 AC027796.2-201ENST00000575326 344 ntBASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 AC022144.1-201ENST00000602255 1580 ntBASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BLOC1S4Q9NUP1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 AC006486.2-201ENST00000624246 2199 ntBASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 AL589987.1-201ENST00000453380 819 ntBASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 AC092337.1-201ENST00000568699 1129 ntBASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.52■□□□□ 0.4
BLOC1S4Q9NUP1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.52■□□□□ 0.39
BLOC1S4Q9NUP1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BLOC1S4Q9NUP1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BLOC1S4Q9NUP1 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.52■□□□□ 0.39
BLOC1S4Q9NUP1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BLOC1S4Q9NUP1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BLOC1S4Q9NUP1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
BLOC1S4Q9NUP1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
BLOC1S4Q9NUP1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BLOC1S4Q9NUP1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BLOC1S4Q9NUP1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms