Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 AC023141.13-201ENST00000604991 943 ntBASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 LINC02084-201ENST00000606069 1096 ntBASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 AC007064.4-201ENST00000637740 555 ntBASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AMBRA1Q9C0C7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 MCCD1P2-201ENST00000423228 335 ntBASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 AC018845.2-201ENST00000568326 409 ntBASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 MIR3687-2-201ENST00000577708 61 ntBASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 MIR3687-1-201ENST00000614492 61 ntBASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 GRK6P1-201ENST00000400595 1711 ntBASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 AC007686.3-201ENST00000619017 3487 ntBASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AMBRA1Q9C0C7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 YBX2P1-201ENST00000394192 760 ntBASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.85□□□□□ -0.03
AMBRA1Q9C0C7 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms