Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
RNF2Q99496 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.7□□□□□ -0.38
RNF2Q99496 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.7□□□□□ -0.38
RNF2Q99496 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.7□□□□□ -0.38
RNF2Q99496 AC096734.2-201ENST00000562054 433 ntBASIC12.7□□□□□ -0.38
RNF2Q99496 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 MIR4515-201ENST00000584082 81 ntBASIC12.7□□□□□ -0.38
RNF2Q99496 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
RNF2Q99496 AC010507.1-201ENST00000633895 436 ntBASIC12.7□□□□□ -0.38
RNF2Q99496 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 AC026748.1-201ENST00000624349 3251 ntBASIC12.7□□□□□ -0.38
RNF2Q99496 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RNF2Q99496 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RNF2Q99496 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
RNF2Q99496 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RNF2Q99496 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.69□□□□□ -0.38
RNF2Q99496 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.69□□□□□ -0.38
RNF2Q99496 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RNF2Q99496 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
RNF2Q99496 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.69□□□□□ -0.38
RNF2Q99496 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.69□□□□□ -0.38
RNF2Q99496 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
RNF2Q99496 AC245100.5-201ENST00000452108 331 ntBASIC12.69□□□□□ -0.38
RNF2Q99496 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.69□□□□□ -0.38
RNF2Q99496 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.69□□□□□ -0.38
RNF2Q99496 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.69□□□□□ -0.38
RNF2Q99496 AL109954.1-202ENST00000564051 2148 ntBASIC12.69□□□□□ -0.38
RNF2Q99496 AC106730.1-201ENST00000566722 1090 ntBASIC12.69□□□□□ -0.38
RNF2Q99496 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.69□□□□□ -0.38
RNF2Q99496 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.69□□□□□ -0.38
RNF2Q99496 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RNF2Q99496 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.69□□□□□ -0.38
RNF2Q99496 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RNF2Q99496 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RNF2Q99496 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF2Q99496 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
RNF2Q99496 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF2Q99496 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RNF2Q99496 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms