Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 Z97205.2-201ENST00000564697 1639 ntBASIC16.75■□□□□ 0.27
UBA3Q8TBC4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 FAM8A3P-201ENST00000427218 844 ntBASIC16.75■□□□□ 0.27
UBA3Q8TBC4 KRT18P64-201ENST00000434946 1219 ntBASIC16.75■□□□□ 0.27
UBA3Q8TBC4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 AC004461.2-201ENST00000629517 803 ntBASIC16.75■□□□□ 0.27
UBA3Q8TBC4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.75■□□□□ 0.27
UBA3Q8TBC4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBA3Q8TBC4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.74■□□□□ 0.27
UBA3Q8TBC4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 HMGN1P19-201ENST00000436976 333 ntBASIC16.74■□□□□ 0.27
UBA3Q8TBC4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 SPDYE18-201ENST00000510091 1050 ntBASIC16.74■□□□□ 0.27
UBA3Q8TBC4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 AC105917.1-201ENST00000506637 2539 ntBASIC16.74■□□□□ 0.27
UBA3Q8TBC4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.74■□□□□ 0.27
UBA3Q8TBC4 AC009090.5-201ENST00000624886 2285 ntBASIC16.73■□□□□ 0.27
UBA3Q8TBC4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBA3Q8TBC4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms