Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIK3C3Q8NEB9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PIK3C3Q8NEB9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.93□□□□□ -0.02
PIK3C3Q8NEB9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIK3C3Q8NEB9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIK3C3Q8NEB9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PIK3C3Q8NEB9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIK3C3Q8NEB9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.93□□□□□ -0.02
PIK3C3Q8NEB9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PIK3C3Q8NEB9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIK3C3Q8NEB9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.93□□□□□ -0.02
PIK3C3Q8NEB9 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.93□□□□□ -0.02
PIK3C3Q8NEB9 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PIK3C3Q8NEB9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 AL513480.1-201ENST00000451731 511 ntBASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.92□□□□□ -0.02
PIK3C3Q8NEB9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 AC109635.5-201ENST00000533593 962 ntBASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 AC034105.1-201ENST00000563488 319 ntBASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PIK3C3Q8NEB9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms