Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFWD3Q6PCD5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 AC099063.4-201ENST00000641099 1602 ntBASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 FAM207CP-201ENST00000443486 507 ntBASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 TERF1P3-201ENST00000505638 1227 ntBASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 AC135586.1-201ENST00000539323 574 ntBASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 MIR6069-201ENST00000620069 79 ntBASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 AL109936.8-201ENST00000641772 604 ntBASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 AC013268.4-201ENST00000637413 2228 ntBASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 KRT8P37-201ENST00000451609 1420 ntBASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.53■□□□□ 0.24
RFWD3Q6PCD5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 AC010491.1-201ENST00000563101 2797 ntBASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 AL035633.1-201ENST00000406139 838 ntBASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 AZGP1P1-201ENST00000411909 902 ntBASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.52■□□□□ 0.24
RFWD3Q6PCD5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms