Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 DNM1P51-201ENST00000558149 522 ntBASIC13.49□□□□□ -0.25
LRRK2Q5S007 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRK2Q5S007 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LRRK2Q5S007 FAM90A2P-201ENST00000511144 1395 ntBASIC13.48□□□□□ -0.25
LRRK2Q5S007 FAM90A25P-201ENST00000528404 1395 ntBASIC13.48□□□□□ -0.25
LRRK2Q5S007 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 AL357373.1-201ENST00000394974 322 ntBASIC13.48□□□□□ -0.25
LRRK2Q5S007 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 AP002803.1-201ENST00000528836 498 ntBASIC13.48□□□□□ -0.25
LRRK2Q5S007 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 MEG3_2.1-201ENST00000611456 105 ntBASIC13.48□□□□□ -0.25
LRRK2Q5S007 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 MIR4683-201ENST00000579659 81 ntBASIC13.48□□□□□ -0.25
LRRK2Q5S007 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 AC090164.2-201ENST00000611487 516 ntBASIC13.48□□□□□ -0.25
LRRK2Q5S007 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 NAP1L6-202ENST00000641404 1222 ntBASIC13.48□□□□□ -0.25
LRRK2Q5S007 AC139713.2-201ENST00000641328 2723 ntBASIC13.48□□□□□ -0.25
LRRK2Q5S007 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRK2Q5S007 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.48□□□□□ -0.25
LRRK2Q5S007 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRK2Q5S007 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRK2Q5S007 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRK2Q5S007 PSMD4P1-201ENST00000433951 1109 ntBASIC13.47□□□□□ -0.25
LRRK2Q5S007 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRK2Q5S007 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRK2Q5S007 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 RPL17P45-201ENST00000586289 509 ntBASIC13.47□□□□□ -0.25
LRRK2Q5S007 AC007718.1-201ENST00000621078 280 ntBASIC13.47□□□□□ -0.25
LRRK2Q5S007 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRK2Q5S007 AC018695.7-201ENST00000624587 2492 ntBASIC13.47□□□□□ -0.25
LRRK2Q5S007 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRK2Q5S007 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRK2Q5S007 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRK2Q5S007 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRK2Q5S007 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 AP001002.3-201ENST00000623482 206 ntBASIC13.47□□□□□ -0.25
LRRK2Q5S007 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
LRRK2Q5S007 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRK2Q5S007 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRK2Q5S007 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRK2Q5S007 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms