Protein–RNA interactions for Protein: Q53TQ3

INO80D, INO80 complex subunit D, humanhuman

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80DQ53TQ3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
INO80DQ53TQ3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
INO80DQ53TQ3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
INO80DQ53TQ3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
INO80DQ53TQ3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.04■□□□□ 0.16
INO80DQ53TQ3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
INO80DQ53TQ3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
INO80DQ53TQ3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 AC138969.3-201ENST00000546612 1459 ntBASIC16.03■□□□□ 0.16
INO80DQ53TQ3 AC138932.2-201ENST00000548268 1459 ntBASIC16.03■□□□□ 0.16
INO80DQ53TQ3 AC126755.4-201ENST00000549796 1459 ntBASIC16.03■□□□□ 0.16
INO80DQ53TQ3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 AL391825.1-201ENST00000457671 1364 ntBASIC16.03■□□□□ 0.16
INO80DQ53TQ3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 SPDYE19P-201ENST00000338590 713 ntBASIC16.03■□□□□ 0.16
INO80DQ53TQ3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 PIN1P1-201ENST00000412108 996 ntBASIC16.03■□□□□ 0.16
INO80DQ53TQ3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 DFFBP1-201ENST00000433250 979 ntBASIC16.03■□□□□ 0.16
INO80DQ53TQ3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 AC138761.1-201ENST00000584393 385 ntBASIC16.03■□□□□ 0.16
INO80DQ53TQ3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 AC011270.2-201ENST00000624293 2550 ntBASIC16.03■□□□□ 0.16
INO80DQ53TQ3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
INO80DQ53TQ3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 AC008741.2-201ENST00000612792 3115 ntBASIC16.02■□□□□ 0.16
INO80DQ53TQ3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 AL353779.1-201ENST00000434793 351 ntBASIC16.02■□□□□ 0.16
INO80DQ53TQ3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 RARRES2P5-201ENST00000564013 466 ntBASIC16.02■□□□□ 0.16
INO80DQ53TQ3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.02■□□□□ 0.16
INO80DQ53TQ3 AC004790.1-201ENST00000612686 536 ntBASIC16.02■□□□□ 0.16
INO80DQ53TQ3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms