Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD97P48960 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD97P48960 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.32■□□□□ 0.04
CD97P48960 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CD97P48960 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CD97P48960 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CD97P48960 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CD97P48960 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CD97P48960 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CD97P48960 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.31■□□□□ 0.04
CD97P48960 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.31■□□□□ 0.04
CD97P48960 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.31■□□□□ 0.04
CD97P48960 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.31■□□□□ 0.04
CD97P48960 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 MIR3909-201ENST00000579518 119 ntBASIC15.31■□□□□ 0.04
CD97P48960 MPDU1-223ENST00000582151 728 ntBASIC15.31■□□□□ 0.04
CD97P48960 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.31■□□□□ 0.04
CD97P48960 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.31■□□□□ 0.04
CD97P48960 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.31■□□□□ 0.04
CD97P48960 MIR6799-201ENST00000620297 69 ntBASIC15.31■□□□□ 0.04
CD97P48960 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.31■□□□□ 0.04
CD97P48960 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.31■□□□□ 0.04
CD97P48960 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CD97P48960 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.31■□□□□ 0.04
CD97P48960 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.31■□□□□ 0.04
CD97P48960 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CD97P48960 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.31■□□□□ 0.04
CD97P48960 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
CD97P48960 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.31■□□□□ 0.04
CD97P48960 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.31■□□□□ 0.04
CD97P48960 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.31■□□□□ 0.04
CD97P48960 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD97P48960 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD97P48960 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CD97P48960 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD97P48960 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.3■□□□□ 0.04
CD97P48960 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD97P48960 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CD97P48960 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.3■□□□□ 0.04
CD97P48960 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CD97P48960 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD97P48960 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.3■□□□□ 0.04
CD97P48960 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CD97P48960 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CD97P48960 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD97P48960 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD97P48960 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CD97P48960 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.3■□□□□ 0.04
CD97P48960 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.3■□□□□ 0.04
CD97P48960 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CD97P48960 U91328.1-201ENST00000437528 223 ntBASIC15.3■□□□□ 0.04
CD97P48960 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD97P48960 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.3■□□□□ 0.04
CD97P48960 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.3■□□□□ 0.04
CD97P48960 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD97P48960 GPR53P-205ENST00000457298 1084 ntBASIC15.3■□□□□ 0.04
CD97P48960 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.3■□□□□ 0.04
CD97P48960 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD97P48960 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.3■□□□□ 0.04
CD97P48960 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.3■□□□□ 0.04
CD97P48960 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.3■□□□□ 0.04
CD97P48960 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD97P48960 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD97P48960 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.3■□□□□ 0.04
CD97P48960 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.3■□□□□ 0.04
CD97P48960 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.3■□□□□ 0.04
CD97P48960 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.3■□□□□ 0.04
CD97P48960 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.3■□□□□ 0.04
CD97P48960 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.3■□□□□ 0.04
CD97P48960 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.3■□□□□ 0.04
CD97P48960 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.3■□□□□ 0.04
CD97P48960 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.3■□□□□ 0.04
CD97P48960 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD97P48960 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CD97P48960 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms