Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
KRT2P35908 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT2P35908 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT2P35908 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.13■□□□□ 0.49
KRT2P35908 AC074338.1-201ENST00000416825 156 ntBASIC18.13■□□□□ 0.49
KRT2P35908 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT2P35908 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT2P35908 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.13■□□□□ 0.49
KRT2P35908 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT2P35908 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT2P35908 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT2P35908 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT2P35908 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT2P35908 AC106028.4-201ENST00000614509 607 ntBASIC18.13■□□□□ 0.49
KRT2P35908 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
KRT2P35908 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT2P35908 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT2P35908 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT2P35908 AC092384.3-202ENST00000564646 2873 ntBASIC18.13■□□□□ 0.49
KRT2P35908 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT2P35908 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT2P35908 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT2P35908 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT2P35908 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KRT2P35908 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.13■□□□□ 0.49
KRT2P35908 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KRT2P35908 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
KRT2P35908 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT2P35908 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
KRT2P35908 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
KRT2P35908 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KRT2P35908 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT2P35908 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT2P35908 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KRT2P35908 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.12■□□□□ 0.49
KRT2P35908 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.12■□□□□ 0.49
KRT2P35908 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT2P35908 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.12■□□□□ 0.49
KRT2P35908 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
KRT2P35908 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.12■□□□□ 0.49
KRT2P35908 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT2P35908 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.12■□□□□ 0.49
KRT2P35908 AC093512.1-201ENST00000617969 520 ntBASIC18.12■□□□□ 0.49
KRT2P35908 AL590560.3-201ENST00000623350 461 ntBASIC18.12■□□□□ 0.49
KRT2P35908 AC087499.5-201ENST00000452760 1342 ntBASIC18.12■□□□□ 0.49
KRT2P35908 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT2P35908 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT2P35908 PPT1-215ENST00000641471 2368 ntBASIC18.12■□□□□ 0.49
KRT2P35908 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT2P35908 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
KRT2P35908 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT2P35908 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT2P35908 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT2P35908 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT2P35908 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT2P35908 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT2P35908 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT2P35908 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT2P35908 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT2P35908 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT2P35908 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT2P35908 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT2P35908 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT2P35908 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT2P35908 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT2P35908 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
KRT2P35908 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT2P35908 AC073347.1-201ENST00000421633 2643 ntBASIC18.11■□□□□ 0.49
KRT2P35908 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT2P35908 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KRT2P35908 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT2P35908 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.11■□□□□ 0.49
KRT2P35908 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT2P35908 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT2P35908 AL844908.2-201ENST00000609461 460 ntBASIC18.11■□□□□ 0.49
KRT2P35908 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
KRT2P35908 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
KRT2P35908 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KRT2P35908 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT2P35908 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT2P35908 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms