Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CKS2P33552 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
CKS2P33552 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.72□□□□□ -0.53
CKS2P33552 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
CKS2P33552 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS2P33552 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS2P33552 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CKS2P33552 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.71□□□□□ -0.53
CKS2P33552 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
CKS2P33552 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.71□□□□□ -0.53
CKS2P33552 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.71□□□□□ -0.53
CKS2P33552 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
CKS2P33552 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
CKS2P33552 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS2P33552 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.71□□□□□ -0.53
CKS2P33552 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CKS2P33552 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS2P33552 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS2P33552 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS2P33552 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS2P33552 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS2P33552 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS2P33552 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS2P33552 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS2P33552 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS2P33552 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS2P33552 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
CKS2P33552 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CKS2P33552 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CKS2P33552 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.71□□□□□ -0.53
CKS2P33552 AK4P3-201ENST00000418260 669 ntBASIC11.71□□□□□ -0.53
CKS2P33552 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.71□□□□□ -0.53
CKS2P33552 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS2P33552 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.71□□□□□ -0.53
CKS2P33552 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.71□□□□□ -0.53
CKS2P33552 AC005412.3-201ENST00000580309 715 ntBASIC11.71□□□□□ -0.53
CKS2P33552 NTF6B-201ENST00000591913 560 ntBASIC11.71□□□□□ -0.53
CKS2P33552 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.71□□□□□ -0.53
CKS2P33552 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC11.71□□□□□ -0.53
CKS2P33552 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.71□□□□□ -0.53
CKS2P33552 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CKS2P33552 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CKS2P33552 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CKS2P33552 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.71□□□□□ -0.54
CKS2P33552 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS2P33552 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS2P33552 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
CKS2P33552 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CKS2P33552 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.71□□□□□ -0.54
CKS2P33552 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
CKS2P33552 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS2P33552 PI4KAP1-204ENST00000612579 1703 ntBASIC11.71□□□□□ -0.54
CKS2P33552 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
CKS2P33552 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS2P33552 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.71□□□□□ -0.54
CKS2P33552 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.71□□□□□ -0.54
CKS2P33552 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CKS2P33552 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.71□□□□□ -0.54
CKS2P33552 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CKS2P33552 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC11.71□□□□□ -0.54
CKS2P33552 AC126365.1-201ENST00000578585 1514 ntBASIC11.7□□□□□ -0.54
CKS2P33552 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS2P33552 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS2P33552 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CKS2P33552 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.7□□□□□ -0.54
CKS2P33552 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
CKS2P33552 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CKS2P33552 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS2P33552 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.7□□□□□ -0.54
CKS2P33552 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.7□□□□□ -0.54
CKS2P33552 AC113347.1-201ENST00000413321 391 ntBASIC11.7□□□□□ -0.54
CKS2P33552 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.7□□□□□ -0.54
CKS2P33552 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CKS2P33552 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.7□□□□□ -0.54
CKS2P33552 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms