Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.18■□□□□ 0.02
LAMA1P25391 AC022748.3-201ENST00000621828 275 ntBASIC15.18■□□□□ 0.02
LAMA1P25391 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LAMA1P25391 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.18■□□□□ 0.02
LAMA1P25391 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LAMA1P25391 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LAMA1P25391 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.18■□□□□ 0.02
LAMA1P25391 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.18■□□□□ 0.02
LAMA1P25391 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.18■□□□□ 0.02
LAMA1P25391 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 EEF1DP6-201ENST00000449232 372 ntBASIC15.18■□□□□ 0.02
LAMA1P25391 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.18■□□□□ 0.02
LAMA1P25391 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.18■□□□□ 0.02
LAMA1P25391 PPY2P-201ENST00000582808 702 ntBASIC15.18■□□□□ 0.02
LAMA1P25391 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.18■□□□□ 0.02
LAMA1P25391 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.18■□□□□ 0.02
LAMA1P25391 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.18■□□□□ 0.02
LAMA1P25391 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LAMA1P25391 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.18■□□□□ 0.02
LAMA1P25391 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LAMA1P25391 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
LAMA1P25391 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.18■□□□□ 0.02
LAMA1P25391 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LAMA1P25391 AC132872.4-202ENST00000622924 2756 ntBASIC15.18■□□□□ 0.02
LAMA1P25391 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LAMA1P25391 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.18■□□□□ 0.02
LAMA1P25391 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.18■□□□□ 0.02
LAMA1P25391 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.18■□□□□ 0.02
LAMA1P25391 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.18■□□□□ 0.02
LAMA1P25391 COX5BP1-201ENST00000507622 393 ntBASIC15.18■□□□□ 0.02
LAMA1P25391 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.18■□□□□ 0.02
LAMA1P25391 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.18■□□□□ 0.02
LAMA1P25391 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LAMA1P25391 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMA1P25391 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.17■□□□□ 0.02
LAMA1P25391 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 AC008132.1-202ENST00000342005 1389 ntBASIC15.17■□□□□ 0.02
LAMA1P25391 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMA1P25391 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LAMA1P25391 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.17■□□□□ 0.02
LAMA1P25391 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMA1P25391 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMA1P25391 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMA1P25391 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMA1P25391 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LAMA1P25391 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 AL138799.1-201ENST00000448213 1675 ntBASIC15.17■□□□□ 0.02
LAMA1P25391 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LAMA1P25391 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.17■□□□□ 0.02
LAMA1P25391 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.17■□□□□ 0.02
LAMA1P25391 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.17■□□□□ 0.02
LAMA1P25391 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.16■□□□□ 0.02
LAMA1P25391 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LAMA1P25391 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LAMA1P25391 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
LAMA1P25391 MAGEA5-201ENST00000446757 942 ntBASIC15.16■□□□□ 0.02
LAMA1P25391 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.16■□□□□ 0.02
LAMA1P25391 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LAMA1P25391 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LAMA1P25391 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.16■□□□□ 0.02
LAMA1P25391 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LAMA1P25391 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LAMA1P25391 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LAMA1P25391 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.16■□□□□ 0.02
LAMA1P25391 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LAMA1P25391 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LAMA1P25391 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.16■□□□□ 0.02
LAMA1P25391 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms