Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ERCC2P18074 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
ERCC2P18074 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.28■□□□□ 0.2
ERCC2P18074 AC136621.1-201ENST00000624017 2304 ntBASIC16.28■□□□□ 0.2
ERCC2P18074 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.28■□□□□ 0.2
ERCC2P18074 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 SSR4P1-203ENST00000599569 2260 ntBASIC16.28■□□□□ 0.2
ERCC2P18074 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.28■□□□□ 0.2
ERCC2P18074 AC090616.6-203ENST00000579186 1945 ntBASIC16.28■□□□□ 0.2
ERCC2P18074 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.28■□□□□ 0.2
ERCC2P18074 TSSK5P-201ENST00000423978 907 ntBASIC16.28■□□□□ 0.2
ERCC2P18074 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.28■□□□□ 0.2
ERCC2P18074 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.28■□□□□ 0.2
ERCC2P18074 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.28■□□□□ 0.2
ERCC2P18074 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.28■□□□□ 0.2
ERCC2P18074 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.28■□□□□ 0.2
ERCC2P18074 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.28■□□□□ 0.2
ERCC2P18074 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
ERCC2P18074 AL390754.1-201ENST00000619088 582 ntBASIC16.28■□□□□ 0.2
ERCC2P18074 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.28■□□□□ 0.2
ERCC2P18074 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
ERCC2P18074 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ERCC2P18074 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ERCC2P18074 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
ERCC2P18074 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ERCC2P18074 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
ERCC2P18074 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ERCC2P18074 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.27■□□□□ 0.2
ERCC2P18074 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
ERCC2P18074 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ERCC2P18074 PKD1P5-201ENST00000532415 10291 ntBASIC16.27■□□□□ 0.2
ERCC2P18074 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.27■□□□□ 0.2
ERCC2P18074 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ERCC2P18074 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
ERCC2P18074 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ERCC2P18074 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ERCC2P18074 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ERCC2P18074 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.27■□□□□ 0.2
ERCC2P18074 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.27■□□□□ 0.2
ERCC2P18074 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.27■□□□□ 0.2
ERCC2P18074 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.27■□□□□ 0.2
ERCC2P18074 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
ERCC2P18074 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.27■□□□□ 0.2
ERCC2P18074 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.27■□□□□ 0.2
ERCC2P18074 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ERCC2P18074 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.27■□□□□ 0.2
ERCC2P18074 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ERCC2P18074 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ERCC2P18074 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ERCC2P18074 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ERCC2P18074 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.27■□□□□ 0.19
ERCC2P18074 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.27■□□□□ 0.19
ERCC2P18074 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ERCC2P18074 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ERCC2P18074 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.26■□□□□ 0.19
ERCC2P18074 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ERCC2P18074 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
ERCC2P18074 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ERCC2P18074 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
ERCC2P18074 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.26■□□□□ 0.19
ERCC2P18074 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ERCC2P18074 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.26■□□□□ 0.19
ERCC2P18074 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ERCC2P18074 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.26■□□□□ 0.19
ERCC2P18074 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC2P18074 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.26■□□□□ 0.19
ERCC2P18074 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.26■□□□□ 0.19
ERCC2P18074 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC2P18074 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC2P18074 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.26■□□□□ 0.19
ERCC2P18074 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.26■□□□□ 0.19
ERCC2P18074 AL109936.8-201ENST00000641772 604 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms