Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.41■□□□□ 0.06
LINGO3P0C6S8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 PRSS29P-201ENST00000440800 595 ntBASIC15.41■□□□□ 0.06
LINGO3P0C6S8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 AC013467.2-201ENST00000605472 835 ntBASIC15.41■□□□□ 0.06
LINGO3P0C6S8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 AC129492.6-201ENST00000611383 1305 ntBASIC15.41■□□□□ 0.06
LINGO3P0C6S8 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LINGO3P0C6S8 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 RPL13AP23-201ENST00000480739 586 ntBASIC15.4■□□□□ 0.06
LINGO3P0C6S8 AC034105.1-201ENST00000563488 319 ntBASIC15.4■□□□□ 0.06
LINGO3P0C6S8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 AC120114.3-201ENST00000611923 658 ntBASIC15.4■□□□□ 0.06
LINGO3P0C6S8 AC010654.1-201ENST00000615722 808 ntBASIC15.4■□□□□ 0.06
LINGO3P0C6S8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 AL928921.2-201ENST00000641325 2442 ntBASIC15.4■□□□□ 0.06
LINGO3P0C6S8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 AC104109.2-201ENST00000602919 1418 ntBASIC15.4■□□□□ 0.06
LINGO3P0C6S8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINGO3P0C6S8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.39■□□□□ 0.05
LINGO3P0C6S8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LINGO3P0C6S8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINGO3P0C6S8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINGO3P0C6S8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINGO3P0C6S8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms