Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 AC079776.1-201ENST00000401540 1152 ntBASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 AL442647.2-201ENST00000429864 857 ntBASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 ACA64.2-201ENST00000459014 129 ntBASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 HILS1-202ENST00000545329 423 ntBASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 RAB43P1-201ENST00000561790 589 ntBASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 MST1L-201ENST00000442552 2185 ntBASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 AC105917.1-201ENST00000506637 2539 ntBASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40ALP0C0E4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 TOMM22P5-201ENST00000416399 439 ntBASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 PHKG1P2-201ENST00000457537 863 ntBASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 AC015936.2-201ENST00000593177 259 ntBASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 AL158212.4-201ENST00000624062 1286 ntBASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 CDC14C-201ENST00000428251 1719 ntBASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 AC103702.1-201ENST00000548801 2630 ntBASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RAB40ALP0C0E4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 AL662844.4-201ENST00000606367 2838 ntBASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms