Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.59□□□□□ -0.07
NKX2-2O95096 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.59□□□□□ -0.07
NKX2-2O95096 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.59□□□□□ -0.07
NKX2-2O95096 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.59□□□□□ -0.07
NKX2-2O95096 AC074044.1-201ENST00000609673 707 ntBASIC14.59□□□□□ -0.07
NKX2-2O95096 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.59□□□□□ -0.07
NKX2-2O95096 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
NKX2-2O95096 AL590560.3-201ENST00000623350 461 ntBASIC14.59□□□□□ -0.07
NKX2-2O95096 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NKX2-2O95096 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX2-2O95096 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX2-2O95096 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
NKX2-2O95096 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NKX2-2O95096 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
NKX2-2O95096 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.59□□□□□ -0.07
NKX2-2O95096 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.59□□□□□ -0.07
NKX2-2O95096 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NKX2-2O95096 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NKX2-2O95096 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.58□□□□□ -0.07
NKX2-2O95096 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
NKX2-2O95096 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.58□□□□□ -0.07
NKX2-2O95096 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.58□□□□□ -0.07
NKX2-2O95096 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NKX2-2O95096 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NKX2-2O95096 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.58□□□□□ -0.07
NKX2-2O95096 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
NKX2-2O95096 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
NKX2-2O95096 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.58□□□□□ -0.07
NKX2-2O95096 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX2-2O95096 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-2O95096 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-2O95096 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-2O95096 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-2O95096 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-2O95096 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.58□□□□□ -0.08
NKX2-2O95096 RPL13P2-201ENST00000440687 659 ntBASIC14.58□□□□□ -0.08
NKX2-2O95096 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.58□□□□□ -0.08
NKX2-2O95096 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.58□□□□□ -0.08
NKX2-2O95096 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-2O95096 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
NKX2-2O95096 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NKX2-2O95096 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX2-2O95096 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-2O95096 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.58□□□□□ -0.08
NKX2-2O95096 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NKX2-2O95096 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.58□□□□□ -0.08
NKX2-2O95096 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NKX2-2O95096 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NKX2-2O95096 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NKX2-2O95096 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-2O95096 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-2O95096 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.58□□□□□ -0.08
NKX2-2O95096 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NKX2-2O95096 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
NKX2-2O95096 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
NKX2-2O95096 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX2-2O95096 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NKX2-2O95096 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.57□□□□□ -0.08
NKX2-2O95096 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX2-2O95096 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX2-2O95096 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
NKX2-2O95096 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NKX2-2O95096 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NKX2-2O95096 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.57□□□□□ -0.08
NKX2-2O95096 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NKX2-2O95096 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.57□□□□□ -0.08
NKX2-2O95096 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.57□□□□□ -0.08
NKX2-2O95096 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.57□□□□□ -0.08
NKX2-2O95096 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.57□□□□□ -0.08
NKX2-2O95096 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.57□□□□□ -0.08
NKX2-2O95096 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.57□□□□□ -0.08
NKX2-2O95096 TSSK5P-201ENST00000423978 907 ntBASIC14.57□□□□□ -0.08
NKX2-2O95096 AC241585.1-201ENST00000433527 519 ntBASIC14.57□□□□□ -0.08
NKX2-2O95096 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.57□□□□□ -0.08
NKX2-2O95096 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.57□□□□□ -0.08
NKX2-2O95096 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.57□□□□□ -0.08
NKX2-2O95096 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.57□□□□□ -0.08
NKX2-2O95096 AC092183.1-201ENST00000469884 875 ntBASIC14.57□□□□□ -0.08
NKX2-2O95096 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NKX2-2O95096 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms