Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NDUFS3O75489 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NDUFS3O75489 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.82■□□□□ 0.12
NDUFS3O75489 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
NDUFS3O75489 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFS3O75489 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NDUFS3O75489 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.82■□□□□ 0.12
NDUFS3O75489 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.82■□□□□ 0.12
NDUFS3O75489 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.82■□□□□ 0.12
NDUFS3O75489 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFS3O75489 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFS3O75489 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.82■□□□□ 0.12
NDUFS3O75489 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.82■□□□□ 0.12
NDUFS3O75489 MIR4313-201ENST00000580760 101 ntBASIC15.82■□□□□ 0.12
NDUFS3O75489 AC027612.4-201ENST00000605371 583 ntBASIC15.82■□□□□ 0.12
NDUFS3O75489 AL691403.2-201ENST00000618460 490 ntBASIC15.82■□□□□ 0.12
NDUFS3O75489 LINC00628-201ENST00000628516 1289 ntBASIC15.82■□□□□ 0.12
NDUFS3O75489 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.82■□□□□ 0.12
NDUFS3O75489 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFS3O75489 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFS3O75489 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFS3O75489 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.82■□□□□ 0.12
NDUFS3O75489 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NDUFS3O75489 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.82■□□□□ 0.12
NDUFS3O75489 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFS3O75489 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFS3O75489 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.82■□□□□ 0.12
NDUFS3O75489 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFS3O75489 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFS3O75489 AC020658.6-201ENST00000623564 1870 ntBASIC15.82■□□□□ 0.12
NDUFS3O75489 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.82■□□□□ 0.12
NDUFS3O75489 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NDUFS3O75489 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NDUFS3O75489 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFS3O75489 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFS3O75489 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFS3O75489 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NDUFS3O75489 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.81■□□□□ 0.12
NDUFS3O75489 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.81■□□□□ 0.12
NDUFS3O75489 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NDUFS3O75489 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.81■□□□□ 0.12
NDUFS3O75489 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.81■□□□□ 0.12
NDUFS3O75489 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.81■□□□□ 0.12
NDUFS3O75489 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NDUFS3O75489 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.81■□□□□ 0.12
NDUFS3O75489 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.81■□□□□ 0.12
NDUFS3O75489 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.81■□□□□ 0.12
NDUFS3O75489 AL512356.2-201ENST00000546955 174 ntBASIC15.81■□□□□ 0.12
NDUFS3O75489 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.81■□□□□ 0.12
NDUFS3O75489 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.81■□□□□ 0.12
NDUFS3O75489 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NDUFS3O75489 AL139384.1-201ENST00000612143 3047 ntBASIC15.81■□□□□ 0.12
NDUFS3O75489 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.81■□□□□ 0.12
NDUFS3O75489 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NDUFS3O75489 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NDUFS3O75489 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
NDUFS3O75489 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NDUFS3O75489 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
NDUFS3O75489 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFS3O75489 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFS3O75489 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.8■□□□□ 0.12
NDUFS3O75489 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NDUFS3O75489 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFS3O75489 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.8■□□□□ 0.12
NDUFS3O75489 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFS3O75489 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.8■□□□□ 0.12
NDUFS3O75489 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFS3O75489 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.8■□□□□ 0.12
NDUFS3O75489 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFS3O75489 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NDUFS3O75489 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFS3O75489 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.8■□□□□ 0.12
NDUFS3O75489 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NDUFS3O75489 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFS3O75489 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NDUFS3O75489 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.8■□□□□ 0.12
NDUFS3O75489 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NDUFS3O75489 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFS3O75489 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFS3O75489 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFS3O75489 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFS3O75489 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFS3O75489 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.8■□□□□ 0.12
NDUFS3O75489 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
NDUFS3O75489 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.8■□□□□ 0.12
NDUFS3O75489 AZGP1P1-201ENST00000411909 902 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms