Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.99■□□□□ 0.15
KDELR3O43731 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.99■□□□□ 0.15
KDELR3O43731 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.99■□□□□ 0.15
KDELR3O43731 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.99■□□□□ 0.15
KDELR3O43731 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 CRB3P1-201ENST00000449338 276 ntBASIC15.99■□□□□ 0.15
KDELR3O43731 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.99■□□□□ 0.15
KDELR3O43731 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
KDELR3O43731 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.99■□□□□ 0.15
KDELR3O43731 AC015910.1-201ENST00000579400 975 ntBASIC15.99■□□□□ 0.15
KDELR3O43731 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.99■□□□□ 0.15
KDELR3O43731 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
KDELR3O43731 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.99■□□□□ 0.15
KDELR3O43731 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.99■□□□□ 0.15
KDELR3O43731 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.99■□□□□ 0.15
KDELR3O43731 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
KDELR3O43731 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.99■□□□□ 0.15
KDELR3O43731 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KDELR3O43731 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
KDELR3O43731 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.98■□□□□ 0.15
KDELR3O43731 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 CLK3P2-201ENST00000427566 1453 ntBASIC15.98■□□□□ 0.15
KDELR3O43731 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
KDELR3O43731 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
KDELR3O43731 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.98■□□□□ 0.15
KDELR3O43731 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.98■□□□□ 0.15
KDELR3O43731 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.98■□□□□ 0.15
KDELR3O43731 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.98■□□□□ 0.15
KDELR3O43731 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.98■□□□□ 0.15
KDELR3O43731 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.98■□□□□ 0.15
KDELR3O43731 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
KDELR3O43731 RN7SL399P-201ENST00000471648 279 ntBASIC15.98■□□□□ 0.15
KDELR3O43731 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.98■□□□□ 0.15
KDELR3O43731 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.98■□□□□ 0.15
KDELR3O43731 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.98■□□□□ 0.15
KDELR3O43731 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.98■□□□□ 0.15
KDELR3O43731 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.98■□□□□ 0.15
KDELR3O43731 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.98■□□□□ 0.15
KDELR3O43731 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
KDELR3O43731 CHCHD2P3-201ENST00000603038 451 ntBASIC15.98■□□□□ 0.15
KDELR3O43731 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.98■□□□□ 0.15
KDELR3O43731 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.98■□□□□ 0.15
KDELR3O43731 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.98■□□□□ 0.15
KDELR3O43731 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.98■□□□□ 0.15
KDELR3O43731 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.98■□□□□ 0.15
KDELR3O43731 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
KDELR3O43731 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
KDELR3O43731 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.98■□□□□ 0.15
KDELR3O43731 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
KDELR3O43731 AC105250.1-201ENST00000509378 2057 ntBASIC15.98■□□□□ 0.15
KDELR3O43731 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.98■□□□□ 0.15
KDELR3O43731 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
KDELR3O43731 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.97■□□□□ 0.15
KDELR3O43731 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
KDELR3O43731 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
KDELR3O43731 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
KDELR3O43731 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.97■□□□□ 0.15
KDELR3O43731 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
KDELR3O43731 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.97■□□□□ 0.15
KDELR3O43731 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
KDELR3O43731 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.97■□□□□ 0.15
KDELR3O43731 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.97■□□□□ 0.15
KDELR3O43731 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.97■□□□□ 0.15
KDELR3O43731 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.97■□□□□ 0.15
KDELR3O43731 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms