Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.76■□□□□ 0.43
ACTN4O43707 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 RPSAP43-201ENST00000402237 625 ntBASIC17.76■□□□□ 0.43
ACTN4O43707 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.76■□□□□ 0.43
ACTN4O43707 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.76■□□□□ 0.43
ACTN4O43707 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.76■□□□□ 0.43
ACTN4O43707 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.76■□□□□ 0.43
ACTN4O43707 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.76■□□□□ 0.43
ACTN4O43707 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.76■□□□□ 0.43
ACTN4O43707 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.76■□□□□ 0.43
ACTN4O43707 AP000344.2-201ENST00000512987 629 ntBASIC17.76■□□□□ 0.43
ACTN4O43707 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.76■□□□□ 0.43
ACTN4O43707 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.76■□□□□ 0.43
ACTN4O43707 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.76■□□□□ 0.43
ACTN4O43707 AC010327.4-202ENST00000591484 748 ntBASIC17.76■□□□□ 0.43
ACTN4O43707 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.76■□□□□ 0.43
ACTN4O43707 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.76■□□□□ 0.43
ACTN4O43707 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.76■□□□□ 0.43
ACTN4O43707 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
ACTN4O43707 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.76■□□□□ 0.43
ACTN4O43707 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ACTN4O43707 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ACTN4O43707 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.76■□□□□ 0.43
ACTN4O43707 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ACTN4O43707 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.75■□□□□ 0.43
ACTN4O43707 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ACTN4O43707 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ACTN4O43707 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.75■□□□□ 0.43
ACTN4O43707 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ACTN4O43707 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ACTN4O43707 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ACTN4O43707 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.75■□□□□ 0.43
ACTN4O43707 RBPMS2P1-201ENST00000437762 623 ntBASIC17.75■□□□□ 0.43
ACTN4O43707 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.75■□□□□ 0.43
ACTN4O43707 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.75■□□□□ 0.43
ACTN4O43707 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.75■□□□□ 0.43
ACTN4O43707 AC026150.2-201ENST00000564693 1156 ntBASIC17.75■□□□□ 0.43
ACTN4O43707 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ACTN4O43707 AC009093.7-201ENST00000623853 1223 ntBASIC17.75■□□□□ 0.43
ACTN4O43707 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.75■□□□□ 0.43
ACTN4O43707 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ACTN4O43707 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
ACTN4O43707 TCAF2P1-201ENST00000291129 2421 ntBASIC17.74■□□□□ 0.43
ACTN4O43707 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ACTN4O43707 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ACTN4O43707 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.74■□□□□ 0.43
ACTN4O43707 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ACTN4O43707 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ACTN4O43707 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ACTN4O43707 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ACTN4O43707 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.74■□□□□ 0.43
ACTN4O43707 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ACTN4O43707 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ACTN4O43707 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.74■□□□□ 0.43
ACTN4O43707 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ACTN4O43707 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
ACTN4O43707 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ACTN4O43707 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ACTN4O43707 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.74■□□□□ 0.43
ACTN4O43707 AL645939.2-201ENST00000427340 991 ntBASIC17.74■□□□□ 0.43
ACTN4O43707 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.74■□□□□ 0.43
ACTN4O43707 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ACTN4O43707 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.74■□□□□ 0.43
ACTN4O43707 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.74■□□□□ 0.43
ACTN4O43707 AC007967.4-201ENST00000614700 386 ntBASIC17.74■□□□□ 0.43
ACTN4O43707 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ACTN4O43707 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ACTN4O43707 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.74■□□□□ 0.43
ACTN4O43707 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ACTN4O43707 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms