Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC098859.1-201ENST00000502915 1238 ntBASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RNA5SP410-201ENST00000516285 106 ntBASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC073592.8-201ENST00000624126 511 ntBASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC144831.1-201ENST00000573312 2656 ntBASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 DBET-201ENST00000630918 3363 ntBASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC138761.1-201ENST00000584393 385 ntBASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AL035633.1-201ENST00000406139 838 ntBASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.78□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC241585.1-201ENST00000433527 519 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms