Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 POM121L14P-201ENST00000406100 1558 ntBASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 AC012531.1-201ENST00000562848 2680 ntBASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
LINC01558Q9Y6Z2 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 HERC2P10-201ENST00000570209 2393 ntBASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 AR-208ENST00000612452 10676 ntTSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 ABHD17AP4-201ENST00000411545 909 ntBASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 AC004987.1-201ENST00000428627 508 ntBASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 DUX4L17-201ENST00000557360 1267 ntBASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 AC010654.1-201ENST00000615722 808 ntBASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 AC010536.3-201ENST00000620306 533 ntBASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 AC013268.1-206ENST00000638368 961 ntBASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 AC112229.1-201ENST00000639295 961 ntBASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 MYCNOS-205ENST00000641950 531 ntBASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 FAM90A11P-201ENST00000518378 2218 ntBASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
LINC01558Q9Y6Z2 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms