Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HPS4Q9NQG7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.4■□□□□ 0.22
HPS4Q9NQG7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 SNX29P1-201ENST00000548357 1007 ntBASIC16.4■□□□□ 0.22
HPS4Q9NQG7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 AC010319.3-201ENST00000597028 470 ntBASIC16.4■□□□□ 0.22
HPS4Q9NQG7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HPS4Q9NQG7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
HPS4Q9NQG7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 BNIP3P1-202ENST00000550043 1585 ntBASIC16.39■□□□□ 0.21
HPS4Q9NQG7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 TARDBPP1-201ENST00000442013 1203 ntBASIC16.39■□□□□ 0.21
HPS4Q9NQG7 CROCCP4-201ENST00000457096 498 ntBASIC16.39■□□□□ 0.21
HPS4Q9NQG7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 MIR6799-201ENST00000620297 69 ntBASIC16.39■□□□□ 0.21
HPS4Q9NQG7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HPS4Q9NQG7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms