Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
SLC6A20Q9NP91 AC009118.2-201ENST00000613275 655 ntBASIC15.21■□□□□ 0.03
SLC6A20Q9NP91 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.21■□□□□ 0.03
SLC6A20Q9NP91 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A20Q9NP91 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
SLC6A20Q9NP91 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A20Q9NP91 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC6A20Q9NP91 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A20Q9NP91 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
SLC6A20Q9NP91 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A20Q9NP91 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC6A20Q9NP91 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A20Q9NP91 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC6A20Q9NP91 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
SLC6A20Q9NP91 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.21■□□□□ 0.02
SLC6A20Q9NP91 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC6A20Q9NP91 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SLC6A20Q9NP91 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.21■□□□□ 0.02
SLC6A20Q9NP91 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.21■□□□□ 0.02
SLC6A20Q9NP91 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 AL589987.1-201ENST00000453380 819 ntBASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A20Q9NP91 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC6A20Q9NP91 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms