Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHD8Q9HCK8 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 AC103810.10-201ENST00000606504 343 ntBASIC14.38□□□□□ -0.11
CHD8Q9HCK8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 AL391256.1-201ENST00000443260 1855 ntBASIC14.38□□□□□ -0.11
CHD8Q9HCK8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 RCC2P8-201ENST00000502779 1035 ntBASIC14.38□□□□□ -0.11
CHD8Q9HCK8 CHCHD2P2-201ENST00000503744 321 ntBASIC14.38□□□□□ -0.11
CHD8Q9HCK8 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHD8Q9HCK8 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 AC026320.2-201ENST00000434379 478 ntBASIC14.37□□□□□ -0.11
CHD8Q9HCK8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 MIR4783-201ENST00000580343 82 ntBASIC14.37□□□□□ -0.11
CHD8Q9HCK8 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 AC073592.2-201ENST00000623062 780 ntBASIC14.37□□□□□ -0.11
CHD8Q9HCK8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 CROCCP2-202ENST00000412962 2773 ntBASIC14.37□□□□□ -0.11
CHD8Q9HCK8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.37□□□□□ -0.11
CHD8Q9HCK8 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 CHCHD2P9-201ENST00000461726 456 ntBASIC14.36□□□□□ -0.11
CHD8Q9HCK8 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.36□□□□□ -0.11
CHD8Q9HCK8 HLA-J-204ENST00000495278 958 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms