Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 CICP13-201ENST00000422015 2789 ntBASIC16.41■□□□□ 0.22
IFT43Q96FT9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 HAUS4P1-201ENST00000406739 1145 ntBASIC16.41■□□□□ 0.22
IFT43Q96FT9 AC245100.5-201ENST00000452108 331 ntBASIC16.41■□□□□ 0.22
IFT43Q96FT9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 MIR4745-201ENST00000577608 62 ntBASIC16.41■□□□□ 0.22
IFT43Q96FT9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 AC008677.1-201ENST00000519230 1561 ntBASIC16.4■□□□□ 0.22
IFT43Q96FT9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 FAM220BP-201ENST00000377689 816 ntBASIC16.4■□□□□ 0.22
IFT43Q96FT9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 AL035633.1-201ENST00000406139 838 ntBASIC16.4■□□□□ 0.22
IFT43Q96FT9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT43Q96FT9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
IFT43Q96FT9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
IFT43Q96FT9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.39■□□□□ 0.21
IFT43Q96FT9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT43Q96FT9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms