Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.66□□□□□ -0.06
HPS1Q92902 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.66□□□□□ -0.06
HPS1Q92902 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HPS1Q92902 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HPS1Q92902 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.65□□□□□ -0.06
HPS1Q92902 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HPS1Q92902 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.65□□□□□ -0.06
HPS1Q92902 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HPS1Q92902 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.65□□□□□ -0.06
HPS1Q92902 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HPS1Q92902 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.65□□□□□ -0.06
HPS1Q92902 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.65□□□□□ -0.06
HPS1Q92902 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.65□□□□□ -0.06
HPS1Q92902 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.65□□□□□ -0.06
HPS1Q92902 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.65□□□□□ -0.06
HPS1Q92902 MIR3687-2-201ENST00000577708 61 ntBASIC14.65□□□□□ -0.06
HPS1Q92902 MIR3687-1-201ENST00000614492 61 ntBASIC14.65□□□□□ -0.06
HPS1Q92902 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.65□□□□□ -0.06
HPS1Q92902 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HPS1Q92902 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.65□□□□□ -0.06
HPS1Q92902 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.65□□□□□ -0.06
HPS1Q92902 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
HPS1Q92902 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HPS1Q92902 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.65□□□□□ -0.06
HPS1Q92902 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HPS1Q92902 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
HPS1Q92902 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
HPS1Q92902 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.65□□□□□ -0.06
HPS1Q92902 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HPS1Q92902 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.65□□□□□ -0.06
HPS1Q92902 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
HPS1Q92902 AC009090.5-201ENST00000624886 2285 ntBASIC14.64□□□□□ -0.07
HPS1Q92902 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 AP002414.3-201ENST00000589352 1468 ntBASIC14.64□□□□□ -0.07
HPS1Q92902 AC232323.1-201ENST00000540724 2099 ntBASIC14.64□□□□□ -0.07
HPS1Q92902 REXO1L5P-201ENST00000622260 2098 ntBASIC14.64□□□□□ -0.07
HPS1Q92902 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.64□□□□□ -0.07
HPS1Q92902 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.64□□□□□ -0.07
HPS1Q92902 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HPS1Q92902 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.64□□□□□ -0.07
HPS1Q92902 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.64□□□□□ -0.07
HPS1Q92902 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.64□□□□□ -0.07
HPS1Q92902 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 ACTG1P4-201ENST00000425123 1122 ntBASIC14.64□□□□□ -0.07
HPS1Q92902 KRT18P27-201ENST00000427733 1299 ntBASIC14.64□□□□□ -0.07
HPS1Q92902 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.64□□□□□ -0.07
HPS1Q92902 AC136632.2-201ENST00000512891 861 ntBASIC14.64□□□□□ -0.07
HPS1Q92902 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.64□□□□□ -0.07
HPS1Q92902 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.64□□□□□ -0.07
HPS1Q92902 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
HPS1Q92902 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HPS1Q92902 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HPS1Q92902 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.64□□□□□ -0.07
HPS1Q92902 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
HPS1Q92902 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.64□□□□□ -0.07
HPS1Q92902 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HPS1Q92902 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HPS1Q92902 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.64□□□□□ -0.07
HPS1Q92902 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HPS1Q92902 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
HPS1Q92902 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms