Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF135Q8IUD6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
RNF135Q8IUD6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF135Q8IUD6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF135Q8IUD6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF135Q8IUD6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 FO681548.1-201ENST00000455617 1132 ntBASIC16.83■□□□□ 0.28
RNF135Q8IUD6 AC007551.1-201ENST00000457394 519 ntBASIC16.83■□□□□ 0.28
RNF135Q8IUD6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 GGT4P-201ENST00000623672 1708 ntBASIC16.83■□□□□ 0.28
RNF135Q8IUD6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF135Q8IUD6 DOC2GP-204ENST00000639052 2548 ntBASIC16.83■□□□□ 0.28
RNF135Q8IUD6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 RARRES2P5-201ENST00000564013 466 ntBASIC16.82■□□□□ 0.28
RNF135Q8IUD6 AC026979.3-201ENST00000607315 403 ntBASIC16.82■□□□□ 0.28
RNF135Q8IUD6 AL022328.1-201ENST00000610050 478 ntBASIC16.82■□□□□ 0.28
RNF135Q8IUD6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 AL139011.1-202ENST00000642063 584 ntBASIC16.82■□□□□ 0.28
RNF135Q8IUD6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 AC092364.2-201ENST00000596710 2692 ntBASIC16.82■□□□□ 0.28
RNF135Q8IUD6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF135Q8IUD6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 TIMM17BP1-201ENST00000545713 516 ntBASIC16.81■□□□□ 0.28
RNF135Q8IUD6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms