Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 AC134915.1-201ENST00000426461 574 ntBASIC16.74■□□□□ 0.27
VARS2Q5ST30 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 RPL13AP25-201ENST00000484130 612 ntBASIC16.74■□□□□ 0.27
VARS2Q5ST30 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 AC124283.3-201ENST00000570869 594 ntBASIC16.74■□□□□ 0.27
VARS2Q5ST30 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 AL512343.1-201ENST00000605837 169 ntBASIC16.74■□□□□ 0.27
VARS2Q5ST30 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VARS2Q5ST30 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VARS2Q5ST30 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VARS2Q5ST30 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARS2Q5ST30 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARS2Q5ST30 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARS2Q5ST30 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.73■□□□□ 0.27
VARS2Q5ST30 VDAC1P7-201ENST00000462417 847 ntBASIC16.73■□□□□ 0.27
VARS2Q5ST30 KRT18P43-201ENST00000469825 1281 ntBASIC16.73■□□□□ 0.27
VARS2Q5ST30 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VARS2Q5ST30 USP32P1-208ENST00000506594 1164 ntBASIC16.73■□□□□ 0.27
VARS2Q5ST30 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 AC000095.1-201ENST00000603208 874 ntBASIC16.73■□□□□ 0.27
VARS2Q5ST30 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 AL512356.3-201ENST00000623005 461 ntBASIC16.73■□□□□ 0.27
VARS2Q5ST30 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARS2Q5ST30 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARS2Q5ST30 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARS2Q5ST30 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VARS2Q5ST30 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 AC018695.7-201ENST00000624587 2492 ntBASIC16.73■□□□□ 0.27
VARS2Q5ST30 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VARS2Q5ST30 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.73■□□□□ 0.27
VARS2Q5ST30 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VARS2Q5ST30 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 AC022210.1-201ENST00000449856 793 ntBASIC16.72■□□□□ 0.27
VARS2Q5ST30 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.72■□□□□ 0.27
VARS2Q5ST30 FAM8A2P-201ENST00000528813 1142 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms