Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RIPPLY3P57055 AL353732.1-201ENST00000569618 1459 ntBASIC13.23□□□□□ -0.29
RIPPLY3P57055 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RIPPLY3P57055 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 MTX1P1-201ENST00000440904 838 ntBASIC13.22□□□□□ -0.29
RIPPLY3P57055 Z97180.1-201ENST00000445173 988 ntBASIC13.22□□□□□ -0.29
RIPPLY3P57055 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 AC002558.1-201ENST00000488906 803 ntBASIC13.22□□□□□ -0.29
RIPPLY3P57055 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 RN7SL596P-201ENST00000582123 288 ntBASIC13.22□□□□□ -0.29
RIPPLY3P57055 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 AP000346.4-201ENST00000614827 381 ntBASIC13.22□□□□□ -0.29
RIPPLY3P57055 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.22□□□□□ -0.29
RIPPLY3P57055 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RIPPLY3P57055 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 AC138028.4-201ENST00000564984 1845 ntBASIC13.21□□□□□ -0.29
RIPPLY3P57055 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 ENPP7P5-201ENST00000541031 1031 ntBASIC13.21□□□□□ -0.29
RIPPLY3P57055 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 BX276092.7-203ENST00000637198 1536 ntBASIC13.21□□□□□ -0.29
RIPPLY3P57055 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RIPPLY3P57055 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RIPPLY3P57055 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms