Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC27P30260 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC27P30260 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC27P30260 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDC27P30260 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC27P30260 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.35■□□□□ 0.53
CDC27P30260 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.35■□□□□ 0.53
CDC27P30260 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC27P30260 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.35■□□□□ 0.53
CDC27P30260 UGT1A2P-201ENST00000454886 866 ntBASIC18.35■□□□□ 0.53
CDC27P30260 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.35■□□□□ 0.53
CDC27P30260 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.35■□□□□ 0.53
CDC27P30260 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC27P30260 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.35■□□□□ 0.53
CDC27P30260 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC27P30260 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC27P30260 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC27P30260 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDC27P30260 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.35■□□□□ 0.53
CDC27P30260 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CDC27P30260 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC27P30260 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC27P30260 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.34■□□□□ 0.53
CDC27P30260 AC114501.2-201ENST00000439631 535 ntBASIC18.34■□□□□ 0.53
CDC27P30260 AL589987.1-201ENST00000453380 819 ntBASIC18.34■□□□□ 0.53
CDC27P30260 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.34■□□□□ 0.53
CDC27P30260 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.34■□□□□ 0.53
CDC27P30260 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC27P30260 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.34■□□□□ 0.53
CDC27P30260 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC27P30260 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC27P30260 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC27P30260 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDC27P30260 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDC27P30260 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CDC27P30260 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 CROCCP1-201ENST00000426910 5675 ntBASIC18.34■□□□□ 0.53
CDC27P30260 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC27P30260 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC27P30260 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.33■□□□□ 0.53
CDC27P30260 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC27P30260 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC27P30260 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.33■□□□□ 0.53
CDC27P30260 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDC27P30260 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDC27P30260 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC27P30260 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
CDC27P30260 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.33■□□□□ 0.53
CDC27P30260 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC27P30260 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.33■□□□□ 0.53
CDC27P30260 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC27P30260 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.33■□□□□ 0.53
CDC27P30260 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC27P30260 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CDC27P30260 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.33■□□□□ 0.53
CDC27P30260 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDC27P30260 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDC27P30260 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC27P30260 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.33■□□□□ 0.52
CDC27P30260 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC27P30260 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.33■□□□□ 0.52
CDC27P30260 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC27P30260 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC27P30260 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.33■□□□□ 0.52
CDC27P30260 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC27P30260 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC27P30260 SLED1-202ENST00000512051 380 ntBASIC18.33■□□□□ 0.52
CDC27P30260 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CDC27P30260 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.33■□□□□ 0.52
CDC27P30260 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.33■□□□□ 0.52
CDC27P30260 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.33■□□□□ 0.52
CDC27P30260 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC27P30260 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
CDC27P30260 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC27P30260 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDC27P30260 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.33■□□□□ 0.52
CDC27P30260 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC27P30260 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC27P30260 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC27P30260 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC27P30260 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC27P30260 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CDC27P30260 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDC27P30260 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDC27P30260 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDC27P30260 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC27P30260 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms