Protein–RNA interactions for Protein: P24863

CCNC, Cyclin-C, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNCP24863 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.13■□□□□ 0.17
CCNCP24863 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.13■□□□□ 0.17
CCNCP24863 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.13■□□□□ 0.17
CCNCP24863 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.13■□□□□ 0.17
CCNCP24863 ZNF890P-202ENST00000530367 1156 ntBASIC16.13■□□□□ 0.17
CCNCP24863 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.13■□□□□ 0.17
CCNCP24863 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.13■□□□□ 0.17
CCNCP24863 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.13■□□□□ 0.17
CCNCP24863 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.13■□□□□ 0.17
CCNCP24863 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.13■□□□□ 0.17
CCNCP24863 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.13■□□□□ 0.17
CCNCP24863 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CCNCP24863 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.13■□□□□ 0.17
CCNCP24863 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CCNCP24863 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.13■□□□□ 0.17
CCNCP24863 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CCNCP24863 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCNCP24863 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCNCP24863 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.12■□□□□ 0.17
CCNCP24863 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.12■□□□□ 0.17
CCNCP24863 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.12■□□□□ 0.17
CCNCP24863 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.12■□□□□ 0.17
CCNCP24863 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCNCP24863 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.12■□□□□ 0.17
CCNCP24863 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCNCP24863 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.12■□□□□ 0.17
CCNCP24863 AC074338.1-201ENST00000416825 156 ntBASIC16.12■□□□□ 0.17
CCNCP24863 AC055876.3-201ENST00000431496 288 ntBASIC16.12■□□□□ 0.17
CCNCP24863 AC241585.1-201ENST00000433527 519 ntBASIC16.12■□□□□ 0.17
CCNCP24863 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.12■□□□□ 0.17
CCNCP24863 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.12■□□□□ 0.17
CCNCP24863 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 SDHAP3-202ENST00000515467 728 ntBASIC16.12■□□□□ 0.17
CCNCP24863 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.12■□□□□ 0.17
CCNCP24863 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.12■□□□□ 0.17
CCNCP24863 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 AC138649.4-201ENST00000612222 287 ntBASIC16.12■□□□□ 0.17
CCNCP24863 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
CCNCP24863 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CCNCP24863 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.12■□□□□ 0.17
CCNCP24863 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCNCP24863 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCNCP24863 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.12■□□□□ 0.17
CCNCP24863 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CCNCP24863 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNCP24863 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCNCP24863 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNCP24863 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNCP24863 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCNCP24863 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNCP24863 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.11■□□□□ 0.17
CCNCP24863 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.11■□□□□ 0.17
CCNCP24863 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCNCP24863 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.11■□□□□ 0.17
CCNCP24863 AC136621.1-201ENST00000624017 2304 ntBASIC16.11■□□□□ 0.17
CCNCP24863 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNCP24863 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCNCP24863 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCNCP24863 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCNCP24863 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.11■□□□□ 0.17
CCNCP24863 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCNCP24863 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms