Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.74□□□□□ -0.37
APOC3P02656 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.74□□□□□ -0.37
APOC3P02656 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.74□□□□□ -0.37
APOC3P02656 AC026271.3-201ENST00000571884 352 ntBASIC12.74□□□□□ -0.37
APOC3P02656 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.74□□□□□ -0.37
APOC3P02656 MARS-234ENST00000630571 216 ntTSL 5 BASIC12.74□□□□□ -0.37
APOC3P02656 MARS-235ENST00000630803 183 ntTSL 3 BASIC12.74□□□□□ -0.37
APOC3P02656 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC3P02656 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC3P02656 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC3P02656 AC106818.1-201ENST00000623223 3242 ntBASIC12.74□□□□□ -0.37
APOC3P02656 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
APOC3P02656 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.74□□□□□ -0.37
APOC3P02656 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
APOC3P02656 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC3P02656 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.74□□□□□ -0.37
APOC3P02656 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
APOC3P02656 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC3P02656 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
APOC3P02656 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC3P02656 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC3P02656 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC3P02656 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC12.73□□□□□ -0.37
APOC3P02656 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 AC113367.3-201ENST00000508316 1912 ntBASIC12.73□□□□□ -0.37
APOC3P02656 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.73□□□□□ -0.37
APOC3P02656 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC3P02656 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
APOC3P02656 FAM8A3P-201ENST00000427218 844 ntBASIC12.73□□□□□ -0.37
APOC3P02656 KRT16P5-201ENST00000455284 522 ntBASIC12.73□□□□□ -0.37
APOC3P02656 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC3P02656 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.73□□□□□ -0.37
APOC3P02656 NTF6G-201ENST00000591094 616 ntBASIC12.73□□□□□ -0.37
APOC3P02656 TRIR-205ENST00000592273 783 ntTSL 3 BASIC12.73□□□□□ -0.37
APOC3P02656 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
APOC3P02656 AC010654.1-201ENST00000615722 808 ntBASIC12.73□□□□□ -0.37
APOC3P02656 AD001527.2-201ENST00000622994 785 ntBASIC12.73□□□□□ -0.37
APOC3P02656 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
APOC3P02656 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
APOC3P02656 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
APOC3P02656 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
APOC3P02656 GPAA1P2-202ENST00000606848 1787 ntBASIC12.73□□□□□ -0.37
APOC3P02656 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
APOC3P02656 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
APOC3P02656 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
APOC3P02656 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.73□□□□□ -0.37
APOC3P02656 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOC3P02656 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC3P02656 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
APOC3P02656 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC3P02656 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC3P02656 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC3P02656 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC3P02656 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC3P02656 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
APOC3P02656 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC3P02656 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC3P02656 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC3P02656 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC3P02656 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
APOC3P02656 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC3P02656 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
APOC3P02656 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC3P02656 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC3P02656 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC3P02656 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC3P02656 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC3P02656 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms