Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.93□□□□□ -0.02
PRAMEF2O60811 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PRAMEF2O60811 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.93□□□□□ -0.02
PRAMEF2O60811 AC009477.1-201ENST00000452936 217 ntBASIC14.93□□□□□ -0.02
PRAMEF2O60811 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.93□□□□□ -0.02
PRAMEF2O60811 AL079307.3-201ENST00000556114 283 ntBASIC14.93□□□□□ -0.02
PRAMEF2O60811 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.93□□□□□ -0.02
PRAMEF2O60811 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.93□□□□□ -0.02
PRAMEF2O60811 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.93□□□□□ -0.02
PRAMEF2O60811 AL133215.2-201ENST00000609242 977 ntBASIC14.93□□□□□ -0.02
PRAMEF2O60811 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.93□□□□□ -0.02
PRAMEF2O60811 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.93□□□□□ -0.02
PRAMEF2O60811 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PRAMEF2O60811 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.93□□□□□ -0.02
PRAMEF2O60811 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
PRAMEF2O60811 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF2O60811 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.92□□□□□ -0.02
PRAMEF2O60811 KRT8P37-201ENST00000451609 1420 ntBASIC14.92□□□□□ -0.02
PRAMEF2O60811 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF2O60811 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRAMEF2O60811 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.91□□□□□ -0.02
PRAMEF2O60811 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRAMEF2O60811 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRAMEF2O60811 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.91□□□□□ -0.02
PRAMEF2O60811 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRAMEF2O60811 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PRAMEF2O60811 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRAMEF2O60811 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRAMEF2O60811 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PRAMEF2O60811 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.91□□□□□ -0.02
PRAMEF2O60811 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.91□□□□□ -0.02
PRAMEF2O60811 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.91□□□□□ -0.02
PRAMEF2O60811 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRAMEF2O60811 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRAMEF2O60811 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PRAMEF2O60811 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PRAMEF2O60811 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRAMEF2O60811 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PRAMEF2O60811 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.91□□□□□ -0.02
PRAMEF2O60811 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.91□□□□□ -0.02
PRAMEF2O60811 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PRAMEF2O60811 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRAMEF2O60811 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms