Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
IFT43Q96FT9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT43Q96FT9 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 NORAD-201ENST00000565493 5339 ntBASIC16.43■□□□□ 0.22
IFT43Q96FT9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 AC125807.1-201ENST00000483097 614 ntBASIC16.43■□□□□ 0.22
IFT43Q96FT9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 ALG1L8P-201ENST00000533887 760 ntBASIC16.43■□□□□ 0.22
IFT43Q96FT9 SLC25A39P2-201ENST00000537614 270 ntBASIC16.43■□□□□ 0.22
IFT43Q96FT9 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 MIR4321-201ENST00000592276 80 ntBASIC16.43■□□□□ 0.22
IFT43Q96FT9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.43■□□□□ 0.22
IFT43Q96FT9 C8orf49-201ENST00000525043 1968 ntBASIC16.43■□□□□ 0.22
IFT43Q96FT9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 FOXO1B-201ENST00000504678 1527 ntBASIC16.43■□□□□ 0.22
IFT43Q96FT9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IFT43Q96FT9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 HLA-H-201ENST00000383620 1096 ntBASIC16.42■□□□□ 0.22
IFT43Q96FT9 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 MIR943-201ENST00000401286 94 ntBASIC16.42■□□□□ 0.22
IFT43Q96FT9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 INGX-202ENST00000489074 768 ntBASIC16.42■□□□□ 0.22
IFT43Q96FT9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 AC093214.1-201ENST00000511688 1107 ntBASIC16.42■□□□□ 0.22
IFT43Q96FT9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 AL158211.3-201ENST00000607385 239 ntBASIC16.42■□□□□ 0.22
IFT43Q96FT9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT43Q96FT9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
IFT43Q96FT9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT43Q96FT9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
IFT43Q96FT9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms