Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.5■□□□□ 0.07
NCLNQ969V3 TFAMP1-201ENST00000412727 736 ntBASIC15.5■□□□□ 0.07
NCLNQ969V3 AC254562.1-201ENST00000417586 456 ntBASIC15.5■□□□□ 0.07
NCLNQ969V3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.5■□□□□ 0.07
NCLNQ969V3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.5■□□□□ 0.07
NCLNQ969V3 SPDYE11-202ENST00000450699 704 ntBASIC15.5■□□□□ 0.07
NCLNQ969V3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.5■□□□□ 0.07
NCLNQ969V3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.5■□□□□ 0.07
NCLNQ969V3 FAM86C2P-203ENST00000528684 1004 ntBASIC15.5■□□□□ 0.07
NCLNQ969V3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NCLNQ969V3 AL135744.1-201ENST00000565098 629 ntBASIC15.5■□□□□ 0.07
NCLNQ969V3 SPDYE9P-201ENST00000570642 692 ntBASIC15.5■□□□□ 0.07
NCLNQ969V3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.5■□□□□ 0.07
NCLNQ969V3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.5■□□□□ 0.07
NCLNQ969V3 AP001160.2-201ENST00000596071 487 ntBASIC15.5■□□□□ 0.07
NCLNQ969V3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.5■□□□□ 0.07
NCLNQ969V3 SPDYE10P-202ENST00000612005 668 ntBASIC15.5■□□□□ 0.07
NCLNQ969V3 SPDYE8P-202ENST00000612377 668 ntBASIC15.5■□□□□ 0.07
NCLNQ969V3 AC020765.3-201ENST00000613051 740 ntBASIC15.5■□□□□ 0.07
NCLNQ969V3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NCLNQ969V3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.5■□□□□ 0.07
NCLNQ969V3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NCLNQ969V3 AC069224.1-201ENST00000566372 1715 ntBASIC15.5■□□□□ 0.07
NCLNQ969V3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCLNQ969V3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCLNQ969V3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.5■□□□□ 0.07
NCLNQ969V3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCLNQ969V3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCLNQ969V3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.5■□□□□ 0.07
NCLNQ969V3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NCLNQ969V3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NCLNQ969V3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.49■□□□□ 0.07
NCLNQ969V3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.49■□□□□ 0.07
NCLNQ969V3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NCLNQ969V3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NCLNQ969V3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.49■□□□□ 0.07
NCLNQ969V3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.49■□□□□ 0.07
NCLNQ969V3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
NCLNQ969V3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.49■□□□□ 0.07
NCLNQ969V3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.49■□□□□ 0.07
NCLNQ969V3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.49■□□□□ 0.07
NCLNQ969V3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.49■□□□□ 0.07
NCLNQ969V3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.49■□□□□ 0.07
NCLNQ969V3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.49■□□□□ 0.07
NCLNQ969V3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.49■□□□□ 0.07
NCLNQ969V3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.49■□□□□ 0.07
NCLNQ969V3 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.49■□□□□ 0.07
NCLNQ969V3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.49■□□□□ 0.07
NCLNQ969V3 CNN2P11-201ENST00000429351 262 ntBASIC15.49■□□□□ 0.07
NCLNQ969V3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.49■□□□□ 0.07
NCLNQ969V3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
NCLNQ969V3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.49■□□□□ 0.07
NCLNQ969V3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.49■□□□□ 0.07
NCLNQ969V3 AC026120.1-201ENST00000611536 926 ntBASIC15.49■□□□□ 0.07
NCLNQ969V3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.49■□□□□ 0.07
NCLNQ969V3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.49■□□□□ 0.07
NCLNQ969V3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.49■□□□□ 0.07
NCLNQ969V3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.49■□□□□ 0.07
NCLNQ969V3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
NCLNQ969V3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.49■□□□□ 0.07
NCLNQ969V3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 WASH6P-202ENST00000359512 1437 ntBASIC15.49■□□□□ 0.07
NCLNQ969V3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NCLNQ969V3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCLNQ969V3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCLNQ969V3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.48■□□□□ 0.07
NCLNQ969V3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCLNQ969V3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCLNQ969V3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NCLNQ969V3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NCLNQ969V3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NCLNQ969V3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NCLNQ969V3 AKAP8P1-201ENST00000434743 1349 ntBASIC15.48■□□□□ 0.07
NCLNQ969V3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NCLNQ969V3 AC016027.1-202ENST00000607927 1699 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms