Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 AC008894.3-201ENST00000624324 3103 ntBASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 SPDYE19P-201ENST00000338590 713 ntBASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 AC093004.1-201ENST00000508850 424 ntBASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 MIR3197-201ENST00000582241 73 ntBASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAM1L1Q8N609 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 TNRC18P3-201ENST00000441896 2691 ntBASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 AP003680.1-201ENST00000598970 3660 ntBASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 AC011270.2-201ENST00000624293 2550 ntBASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 MEP1AP4-201ENST00000423244 1087 ntBASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 GNAQP1-201ENST00000444815 1067 ntBASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 TPRX2P-201ENST00000535362 881 ntBASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 AC138969.3-201ENST00000546612 1459 ntBASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 AC138932.2-201ENST00000548268 1459 ntBASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 AC126755.4-201ENST00000549796 1459 ntBASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAM1L1Q8N609 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAM1L1Q8N609 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAM1L1Q8N609 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAM1L1Q8N609 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAM1L1Q8N609 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAM1L1Q8N609 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAM1L1Q8N609 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRAM1L1Q8N609 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAM1L1Q8N609 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms