Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 TARDBPP1-201ENST00000442013 1203 ntBASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 AC051619.7-201ENST00000568314 623 ntBASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.26■□□□□ 0.03
PRAMEF9Q5VWM5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 AL138828.2-201ENST00000615812 383 ntBASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 AC138035.3-201ENST00000622706 2791 ntBASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 AL109954.1-202ENST00000564051 2148 ntBASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF9Q5VWM5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 C18orf15-201ENST00000623680 2534 ntBASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 TUBB3P1-201ENST00000405796 1332 ntBASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF9Q5VWM5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms