Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC01559Q495D7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01559Q495D7 AC129492.6-201ENST00000611383 1305 ntBASIC12.11□□□□□ -0.47
LINC01559Q495D7 MFSD8-213ENST00000641134 1327 ntBASIC12.11□□□□□ -0.47
LINC01559Q495D7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 AC007618.1-201ENST00000366455 732 ntBASIC12.1□□□□□ -0.47
LINC01559Q495D7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 PCED1CP-201ENST00000419887 785 ntBASIC12.1□□□□□ -0.47
LINC01559Q495D7 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 TMPOP1-202ENST00000424642 1267 ntBASIC12.1□□□□□ -0.47
LINC01559Q495D7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 SCAND3P1-201ENST00000439854 1060 ntBASIC12.1□□□□□ -0.47
LINC01559Q495D7 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 AC089999.1-201ENST00000460336 374 ntBASIC12.1□□□□□ -0.47
LINC01559Q495D7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 GTF2IP6-201ENST00000583143 541 ntBASIC12.1□□□□□ -0.47
LINC01559Q495D7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.1□□□□□ -0.47
LINC01559Q495D7 AL451086.1-201ENST00000605596 223 ntBASIC12.1□□□□□ -0.47
LINC01559Q495D7 AC027644.3-201ENST00000607978 557 ntBASIC12.1□□□□□ -0.47
LINC01559Q495D7 AC112503.2-201ENST00000609005 552 ntBASIC12.1□□□□□ -0.47
LINC01559Q495D7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 AC120349.3-201ENST00000624377 529 ntBASIC12.1□□□□□ -0.47
LINC01559Q495D7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 AL139424.3-202ENST00000641619 917 ntBASIC12.1□□□□□ -0.47
LINC01559Q495D7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 AF064858.1-201ENST00000417335 1412 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 AL132996.1-201ENST00000569865 1431 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC01559Q495D7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC01559Q495D7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01559Q495D7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01559Q495D7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01559Q495D7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC01559Q495D7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LINC01559Q495D7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC01559Q495D7 AC006486.2-201ENST00000624246 2199 ntBASIC12.09□□□□□ -0.47
LINC01559Q495D7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01559Q495D7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01559Q495D7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LINC01559Q495D7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LINC01559Q495D7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC01559Q495D7 IER3-202ENST00000376377 1350 ntBASIC12.09□□□□□ -0.47
LINC01559Q495D7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01559Q495D7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01559Q495D7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC01559Q495D7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LINC01559Q495D7 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms