Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.18■□□□□ 0.34
SNRPFP62306 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SNRPFP62306 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SNRPFP62306 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.18■□□□□ 0.34
SNRPFP62306 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.18■□□□□ 0.34
SNRPFP62306 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.18■□□□□ 0.34
SNRPFP62306 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 TIMM17BP1-201ENST00000545713 516 ntBASIC17.18■□□□□ 0.34
SNRPFP62306 LINC01115-203ENST00000606068 577 ntBASIC17.18■□□□□ 0.34
SNRPFP62306 AC004461.2-201ENST00000629517 803 ntBASIC17.18■□□□□ 0.34
SNRPFP62306 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SNRPFP62306 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.18■□□□□ 0.34
SNRPFP62306 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.18■□□□□ 0.34
SNRPFP62306 AC092850.2-201ENST00000623821 2697 ntBASIC17.18■□□□□ 0.34
SNRPFP62306 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.18■□□□□ 0.34
SNRPFP62306 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
SNRPFP62306 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SNRPFP62306 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.18■□□□□ 0.34
SNRPFP62306 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.17■□□□□ 0.34
SNRPFP62306 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNRPFP62306 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SNRPFP62306 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.17■□□□□ 0.34
SNRPFP62306 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
SNRPFP62306 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNRPFP62306 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SNRPFP62306 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNRPFP62306 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNRPFP62306 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNRPFP62306 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.17■□□□□ 0.34
SNRPFP62306 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.17■□□□□ 0.34
SNRPFP62306 AF228730.6-201ENST00000641497 218 ntBASIC17.17■□□□□ 0.34
SNRPFP62306 AC084121.3-201ENST00000641716 218 ntBASIC17.17■□□□□ 0.34
SNRPFP62306 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SNRPFP62306 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SNRPFP62306 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.17■□□□□ 0.34
SNRPFP62306 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.17■□□□□ 0.34
SNRPFP62306 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNRPFP62306 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SNRPFP62306 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.17■□□□□ 0.34
SNRPFP62306 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SNRPFP62306 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNRPFP62306 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.17■□□□□ 0.34
SNRPFP62306 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.17■□□□□ 0.34
SNRPFP62306 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
SNRPFP62306 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.16■□□□□ 0.34
SNRPFP62306 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.16■□□□□ 0.34
SNRPFP62306 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.16■□□□□ 0.34
SNRPFP62306 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.16■□□□□ 0.34
SNRPFP62306 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SNRPFP62306 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.16■□□□□ 0.34
SNRPFP62306 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.16■□□□□ 0.34
SNRPFP62306 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.16■□□□□ 0.34
SNRPFP62306 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.16■□□□□ 0.34
SNRPFP62306 KRT18P43-201ENST00000469825 1281 ntBASIC17.16■□□□□ 0.34
SNRPFP62306 AC093214.1-201ENST00000511688 1107 ntBASIC17.16■□□□□ 0.34
SNRPFP62306 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.16■□□□□ 0.34
SNRPFP62306 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.16■□□□□ 0.34
SNRPFP62306 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
SNRPFP62306 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.16■□□□□ 0.34
SNRPFP62306 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.16■□□□□ 0.34
SNRPFP62306 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNRPFP62306 PAUPAR-201ENST00000630360 2965 ntBASIC17.16■□□□□ 0.34
SNRPFP62306 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SNRPFP62306 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNRPFP62306 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNRPFP62306 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
SNRPFP62306 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNRPFP62306 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms