Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC144831.1-201ENST00000573312 2656 ntBASIC14.98□□□□□ -0.01
SMSP52788 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SMSP52788 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.97□□□□□ -0.01
SMSP52788 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.97□□□□□ -0.01
SMSP52788 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.97□□□□□ -0.01
SMSP52788 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SMSP52788 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.97□□□□□ -0.01
SMSP52788 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.97□□□□□ -0.01
SMSP52788 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.97□□□□□ -0.01
SMSP52788 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
SMSP52788 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.97□□□□□ -0.01
SMSP52788 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SMSP52788 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.97□□□□□ -0.01
SMSP52788 GPS2P2-201ENST00000430745 888 ntBASIC14.97□□□□□ -0.01
SMSP52788 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.97□□□□□ -0.01
SMSP52788 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.97□□□□□ -0.01
SMSP52788 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SMSP52788 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 AC109635.5-201ENST00000533593 962 ntBASIC14.97□□□□□ -0.01
SMSP52788 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.97□□□□□ -0.01
SMSP52788 LINC02560-201ENST00000596379 459 ntBASIC14.97□□□□□ -0.01
SMSP52788 MIR6080-201ENST00000617359 66 ntBASIC14.97□□□□□ -0.01
SMSP52788 AC008761.3-201ENST00000624803 892 ntBASIC14.97□□□□□ -0.01
SMSP52788 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.97□□□□□ -0.01
SMSP52788 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.97□□□□□ -0.01
SMSP52788 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
SMSP52788 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMSP52788 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.97□□□□□ -0.01
SMSP52788 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
SMSP52788 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.97□□□□□ -0.01
SMSP52788 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.97□□□□□ -0.01
SMSP52788 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SMSP52788 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.96□□□□□ -0.01
SMSP52788 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.96□□□□□ -0.01
SMSP52788 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SMSP52788 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SMSP52788 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SMSP52788 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.96□□□□□ -0.01
SMSP52788 WASH6P-202ENST00000359512 1437 ntBASIC14.96□□□□□ -0.01
SMSP52788 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.96□□□□□ -0.01
SMSP52788 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.96□□□□□ -0.01
SMSP52788 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SMSP52788 HCG4-201ENST00000418983 998 ntBASIC14.96□□□□□ -0.01
SMSP52788 AC073347.1-201ENST00000421633 2643 ntBASIC14.96□□□□□ -0.01
SMSP52788 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.96□□□□□ -0.01
SMSP52788 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.96□□□□□ -0.01
SMSP52788 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SMSP52788 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.96□□□□□ -0.01
SMSP52788 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.96□□□□□ -0.01
SMSP52788 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.96□□□□□ -0.01
SMSP52788 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.96□□□□□ -0.01
SMSP52788 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.96□□□□□ -0.01
SMSP52788 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.96□□□□□ -0.01
SMSP52788 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SMSP52788 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMSP52788 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SMSP52788 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
SMSP52788 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.96□□□□□ -0.02
SMSP52788 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SMSP52788 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.96□□□□□ -0.02
SMSP52788 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.96□□□□□ -0.02
SMSP52788 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SMSP52788 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMSP52788 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMSP52788 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SMSP52788 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMSP52788 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMSP52788 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMSP52788 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SMSP52788 AC008677.1-201ENST00000519230 1561 ntBASIC14.95□□□□□ -0.02
SMSP52788 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms