Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXE1O00358 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXE1O00358 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXE1O00358 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXE1O00358 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXE1O00358 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXE1O00358 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
FOXE1O00358 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXE1O00358 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
FOXE1O00358 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXE1O00358 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
FOXE1O00358 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXE1O00358 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FOXE1O00358 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXE1O00358 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXE1O00358 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FOXE1O00358 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXE1O00358 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXE1O00358 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
FOXE1O00358 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXE1O00358 AC025678.2-201ENST00000562061 970 ntBASIC15.12■□□□□ 0.01
FOXE1O00358 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXE1O00358 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXE1O00358 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXE1O00358 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXE1O00358 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
FOXE1O00358 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
FOXE1O00358 AL691403.2-201ENST00000618460 490 ntBASIC15.12■□□□□ 0.01
FOXE1O00358 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXE1O00358 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXE1O00358 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FOXE1O00358 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXE1O00358 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXE1O00358 AC009090.5-201ENST00000624886 2285 ntBASIC15.12■□□□□ 0.01
FOXE1O00358 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
FOXE1O00358 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXE1O00358 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
FOXE1O00358 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXE1O00358 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXE1O00358 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXE1O00358 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXE1O00358 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXE1O00358 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
FOXE1O00358 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
FOXE1O00358 TARDBPP1-201ENST00000442013 1203 ntBASIC15.11■□□□□ 0.01
FOXE1O00358 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.11■□□□□ 0.01
FOXE1O00358 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXE1O00358 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
FOXE1O00358 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXE1O00358 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.11■□□□□ 0.01
FOXE1O00358 AL033527.5-202ENST00000641632 1098 ntBASIC15.11■□□□□ 0.01
FOXE1O00358 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXE1O00358 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
FOXE1O00358 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 AL109954.1-202ENST00000564051 2148 ntBASIC15.11■□□□□ 0.01
FOXE1O00358 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXE1O00358 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
FOXE1O00358 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXE1O00358 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXE1O00358 AC112693.3-201ENST00000624819 1983 ntBASIC15.11■□□□□ 0.01
FOXE1O00358 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
FOXE1O00358 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms