Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3BA6NDS4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 SOCS2P1-201ENST00000417727 557 ntBASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 RPSAP52-203ENST00000622976 1023 ntBASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 AL607033.1-201ENST00000623900 1599 ntBASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 INTS4P2-202ENST00000614726 2019 ntBASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3BA6NDS4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 SNX29P1-201ENST00000548357 1007 ntBASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 MIR5189-201ENST00000577370 114 ntBASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 AL049840.4-201ENST00000602422 811 ntBASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 AL022328.1-201ENST00000610050 478 ntBASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 AC018892.3-201ENST00000623986 2499 ntBASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3BA6NDS4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TBC1D3BA6NDS4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms