Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL4A3BPQ9Y5P4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
COL4A3BPQ9Y5P4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL4A3BPQ9Y5P4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL4A3BPQ9Y5P4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL4A3BPQ9Y5P4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL4A3BPQ9Y5P4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL4A3BPQ9Y5P4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.78■□□□□ 0.44
COL4A3BPQ9Y5P4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
COL4A3BPQ9Y5P4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL4A3BPQ9Y5P4 PRAL-201ENST00000624952 3286 ntBASIC17.77■□□□□ 0.43
COL4A3BPQ9Y5P4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL4A3BPQ9Y5P4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL4A3BPQ9Y5P4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL4A3BPQ9Y5P4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COL4A3BPQ9Y5P4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.77■□□□□ 0.43
COL4A3BPQ9Y5P4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL4A3BPQ9Y5P4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.77■□□□□ 0.43
COL4A3BPQ9Y5P4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COL4A3BPQ9Y5P4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL4A3BPQ9Y5P4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 KRT8P37-201ENST00000451609 1420 ntBASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 COX20P2-201ENST00000452636 358 ntBASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 AC004840.1-201ENST00000636359 365 ntBASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL4A3BPQ9Y5P4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 REXO1L1P-202ENST00000608646 1974 ntBASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 EEF1DP4-201ENST00000446006 880 ntBASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.75■□□□□ 0.43
COL4A3BPQ9Y5P4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms