Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AP001889.1-201ENST00000525414 633 ntBASIC16.48■□□□□ 0.23
YIPF1Q9Y548 AC009486.1-201ENST00000569860 813 ntBASIC16.48■□□□□ 0.23
YIPF1Q9Y548 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 MIR4313-201ENST00000580760 101 ntBASIC16.48■□□□□ 0.23
YIPF1Q9Y548 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 CTBP2P5-201ENST00000454986 1264 ntBASIC16.47■□□□□ 0.23
YIPF1Q9Y548 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 AC015910.1-201ENST00000579400 975 ntBASIC16.47■□□□□ 0.23
YIPF1Q9Y548 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 AC107373.2-201ENST00000607735 490 ntBASIC16.47■□□□□ 0.23
YIPF1Q9Y548 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
YIPF1Q9Y548 AC124067.4-201ENST00000519691 2379 ntBASIC16.46■□□□□ 0.23
YIPF1Q9Y548 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 MSTO2P-201ENST00000314835 1709 ntBASIC16.46■□□□□ 0.23
YIPF1Q9Y548 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 AC005229.1-201ENST00000392885 409 ntBASIC16.46■□□□□ 0.23
YIPF1Q9Y548 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 AL355864.2-201ENST00000447420 863 ntBASIC16.46■□□□□ 0.23
YIPF1Q9Y548 BNIP3P42-201ENST00000454982 569 ntBASIC16.46■□□□□ 0.23
YIPF1Q9Y548 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 AC026410.3-201ENST00000514280 936 ntBASIC16.46■□□□□ 0.23
YIPF1Q9Y548 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 AP001063.1-201ENST00000568332 529 ntBASIC16.46■□□□□ 0.23
YIPF1Q9Y548 BNIP3P29-201ENST00000598302 571 ntBASIC16.46■□□□□ 0.23
YIPF1Q9Y548 AC011447.5-201ENST00000616168 564 ntBASIC16.46■□□□□ 0.23
YIPF1Q9Y548 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 AL033527.4-201ENST00000641026 673 ntBASIC16.46■□□□□ 0.23
YIPF1Q9Y548 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.46■□□□□ 0.23
YIPF1Q9Y548 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms