Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 SPCS2P1-201ENST00000561636 679 ntBASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 AL390754.1-201ENST00000619088 582 ntBASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT6Q9ULM6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 CYP4F24P-201ENST00000586049 1580 ntBASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 AC010491.1-201ENST00000563101 2797 ntBASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 BCRP1-201ENST00000444246 691 ntBASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 IGHV3-42-201ENST00000520410 361 ntBASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 KRT8P12-202ENST00000472924 1397 ntBASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CNOT6Q9ULM6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.96■□□□□ 0.14
CNOT6Q9ULM6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.96■□□□□ 0.14
CNOT6Q9ULM6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT6Q9ULM6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CNOT6Q9ULM6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CNOT6Q9ULM6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.96■□□□□ 0.14
CNOT6Q9ULM6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 BASP1P1-201ENST00000430708 665 ntBASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 AC241585.1-201ENST00000433527 519 ntBASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 AC004890.2-204ENST00000481968 304 ntBASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 AL096865.1-201ENST00000606796 927 ntBASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CNOT6Q9ULM6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms