Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF183Q96D59 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.88□□□□□ -0.51
RNF183Q96D59 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
RNF183Q96D59 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.88□□□□□ -0.51
RNF183Q96D59 AC241585.1-201ENST00000433527 519 ntBASIC11.88□□□□□ -0.51
RNF183Q96D59 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.88□□□□□ -0.51
RNF183Q96D59 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF183Q96D59 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF183Q96D59 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF183Q96D59 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF183Q96D59 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
RNF183Q96D59 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF183Q96D59 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
RNF183Q96D59 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF183Q96D59 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.87□□□□□ -0.51
RNF183Q96D59 AC079781.5-202ENST00000641784 3743 ntBASIC11.87□□□□□ -0.51
RNF183Q96D59 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 AC144831.1-201ENST00000573312 2656 ntBASIC11.87□□□□□ -0.51
RNF183Q96D59 PCGF3-213ENST00000620529 1899 ntBASIC11.87□□□□□ -0.51
RNF183Q96D59 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.87□□□□□ -0.51
RNF183Q96D59 AL589702.1-201ENST00000641229 1509 ntBASIC11.87□□□□□ -0.51
RNF183Q96D59 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.87□□□□□ -0.51
RNF183Q96D59 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
RNF183Q96D59 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.87□□□□□ -0.51
RNF183Q96D59 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RNF183Q96D59 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC11.87□□□□□ -0.51
RNF183Q96D59 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.87□□□□□ -0.51
RNF183Q96D59 LINC01144-201ENST00000626198 1710 ntBASIC11.87□□□□□ -0.51
RNF183Q96D59 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.87□□□□□ -0.51
RNF183Q96D59 AC092580.3-201ENST00000430932 139 ntBASIC11.87□□□□□ -0.51
RNF183Q96D59 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.87□□□□□ -0.51
RNF183Q96D59 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.87□□□□□ -0.51
RNF183Q96D59 HLA-V-204ENST00000476601 1289 ntBASIC11.87□□□□□ -0.51
RNF183Q96D59 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.87□□□□□ -0.51
RNF183Q96D59 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.87□□□□□ -0.51
RNF183Q96D59 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.87□□□□□ -0.51
RNF183Q96D59 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.87□□□□□ -0.51
RNF183Q96D59 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.87□□□□□ -0.51
RNF183Q96D59 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.87□□□□□ -0.51
RNF183Q96D59 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.87□□□□□ -0.51
RNF183Q96D59 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC11.87□□□□□ -0.51
RNF183Q96D59 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
RNF183Q96D59 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
RNF183Q96D59 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RNF183Q96D59 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.87□□□□□ -0.51
RNF183Q96D59 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
RNF183Q96D59 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
RNF183Q96D59 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF183Q96D59 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.87□□□□□ -0.51
RNF183Q96D59 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
RNF183Q96D59 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.86□□□□□ -0.51
RNF183Q96D59 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11.86□□□□□ -0.51
RNF183Q96D59 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RNF183Q96D59 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.86□□□□□ -0.51
RNF183Q96D59 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms